SFTPC

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SFTPC RNA expression is significantly associated with the go_rna of many other GO terms, with 1,787 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SFTPC-associated GO terms across cancer lineages are ATP metabolic process, Regulation of autophagosome assembly, and Cellular respiration. Each is linked with SFTPC in more than 4 cancer types. Because this analysis shows association rather than direction, both SFTPC-to-partner and partner-to-SFTPC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATP metabolic process grouped by SFTPC-low versus SFTPC-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SFTPC→partner) and Y-score (partner→SFTPC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINATP metabolic process →+0.046+0.898.001.00135
PANCREASRegulation of autophagosome assembly →+0.056+0.100<.001.00534
SKINCellular respiration →+0.077+1.451<.001<.00134
SKINAerobic respiration →+0.090+1.792<.001<.00134
SKINPurine ribonucleoside triphosphate metabolic process →+0.043+0.886.001.00134
SKINNegative regulation of hydrogen peroxide metabolic process →+0.183+1.877<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,787 associations by consensus.

ATP metabolic process by SFTPC expression — SKIN

Box plot of ATP metabolic process in SFTPC-low vs SFTPC-high samples in SKIN.

Explore this box plot interactively →

Exploration