SERPINI2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SERPINI2 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SERPINI2-associated genes across cancer lineages are MAGEB5 and PBOV1. Each is linked with SERPINI2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SERPINI2-to-partner and partner-to-SERPINI2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAGEB5 grouped by SERPINI2-low versus SERPINI2-high in LUNG_NSCLC_LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINI2→partner) and Y-score (partner→SERPINI2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCMAGEB5 →+0.033+4.643<.001.00831
SKINPBOV1 →+0.012+3.518<.001.00131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

MAGEB5 by SERPINI2 expression — LUNG_NSCLC_LUSC

Box plot of MAGEB5 in SERPINI2-low vs SERPINI2-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration