SERPINB3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SERPINB3 protein abundance is significantly associated with the RNA expression of many other genes, with 9,996 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SERPINB3-associated genes across cancer lineages are KRT6B, KRT6A, and SERPINB4. Each is linked with SERPINB3 in more than 4 cancer types. Because this analysis shows association rather than direction, both SERPINB3-to-partner and partner-to-SERPINB3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SERPINB3 versus KRT6B in LSCC, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINB3→partner) and Y-score (partner→SERPINB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCKRT6B →+2.676+1.642<.001<.00135
UCECKRT6A →+2.760+1.721<.001<.00135
LSCCSERPINB4 →+2.915+2.332<.001<.00135
HNSCGJB6 →+2.220+1.021<.001<.00134
PDACLYPD3 →+1.041+1.425<.001<.00134
UCECDSG3 →+2.051+1.419<.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,996 associations by consensus.

SERPINB3 vs KRT6B — LSCC

Per-sample scatter of SERPINB3 vs KRT6B in LSCC (Pearson r = 0.38).

Explore this scatter interactively →

Exploration