SERPINA6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SERPINA6 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SERPINA6-associated genes across cancer lineages are UCMA, GYS2, and KRTAP13-4. Each is linked with SERPINA6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SERPINA6-to-partner and partner-to-SERPINA6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UCMA grouped by SERPINA6-low versus SERPINA6-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINA6→partner) and Y-score (partner→SERPINA6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaUCMA →+0.059+2.926<.001.00931
SKINGYS2 →+0.016+4.467<.001.00431
SKINKRTAP13-4 →+0.030+5.022<.001.00231
SKINKRTAP19-8 →+0.161+4.415<.001.00731
BREASTGZMK →+0.056+5.169<.001.00531
LUNG_NSCLC_LUADKRTAP22-2 →+0.221+5.228<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

UCMA by SERPINA6 expression — BLOOD_Leukemia

Box plot of UCMA in SERPINA6-low vs SERPINA6-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration