SERINC5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SERINC5 protein abundance is significantly associated with the RNA expression of many other genes, with 6,443 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SERINC5-associated genes across cancer lineages are PLEKHA4, TNFAIP6, and MARVELD2. Each is linked with SERINC5 in more than 3 cancer types. Because this analysis shows association rather than direction, both SERINC5-to-partner and partner-to-SERINC5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SERINC5 versus PLEKHA4 in OV, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERINC5→partner) and Y-score (partner→SERINC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPLEKHA4 →-0.966-0.686.004.00134
GBMTNFAIP6 →-1.006-0.552.001<.00134
PDACMARVELD2 →+0.664+0.953.004.00334
LSCCGLTP →+1.243+0.519<.001.00134
OVRARRES1 →-1.312-0.511.004.00533
HNSCABI3BP →-1.074-0.363<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,443 associations by consensus.

SERINC5 vs PLEKHA4 — OV

Per-sample scatter of SERINC5 vs PLEKHA4 in OV (Pearson r = -0.37).

Explore this scatter interactively →

Exploration