SERINC4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SERINC4 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,045 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SERINC4-associated GO terms across cancer lineages are Circadian sleep/wake cycle, UDP biosynthetic process, and Pyrimidine ribonucleoside diphosphate biosynthetic process. Each is linked with SERINC4 in more than 10 cancer types. Because this analysis shows association rather than direction, both SERINC4-to-partner and partner-to-SERINC4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SERINC4→partner) and Y-score (partner→SERINC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaCircadian sleep/wake cycle →+0.161+0.353<.001<.001311
UPPER_AERODIGESTIVE_TRACTUDP biosynthetic process →-0.093-0.210.006.00539
UPPER_AERODIGESTIVE_TRACTPyrimidine ribonucleoside diphosphate biosynthetic process →-0.093-0.210.006.00539
LUNG_NSCLC_LUADRegulation of cAMP-dependent protein kinase activity →+0.438+0.237.001<.00137
OVARYPeptidyl-lysine acetylation →+0.085+0.285.003<.00137
STOMACHThymidine biosynthetic process →-0.165-0.404.008<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,045 associations by consensus.

Exploration