SENP7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SENP7 mutation is significantly associated with the RNA expression of many other genes, with 3,983 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SENP7-associated genes across cancer lineages are SNRPD3, SKA2, and PRC1. Each is linked with SENP7 in more than 3 cancer types. Because this analysis shows association rather than direction, both SENP7-to-partner and partner-to-SENP7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRPD3 grouped by SENP7-low versus SENP7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SENP7→partner) and Y-score (partner→SENP7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNRPD3 →+0.295+1.947.001.00234
UCECSKA2 →+0.599+1.794<.001<.00134
UCECPRC1 →+0.631+2.279<.001<.00134
UCECMED27 →+0.400+1.649<.001<.00134
UCECSKA1 →+0.700+1.794<.001<.00134
UCECORC1 →+0.684+2.758<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,983 associations by consensus.

SNRPD3 by SENP7 expression — UCEC

Box plot of SNRPD3 in SENP7-low vs SENP7-high samples in UCEC.

Explore this box plot interactively →

Exploration