SENP1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SENP1 mutation is significantly associated with the RNA expression of many other genes, with 4,208 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SENP1-associated genes across cancer lineages are RNA5SP38, HNRNPMP2, and NDUFA5P6. Each is linked with SENP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SENP1-to-partner and partner-to-SENP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP38 grouped by SENP1-low versus SENP1-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SENP1→partner) and Y-score (partner→SENP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARNA5SP38 →+0.194+4.317<.001.00732
CESCHNRNPMP2 →+0.047+4.757<.001.00432
STADNDUFA5P6 →+0.830+3.873<.001.00432
SKCMRNA5SP106 →+0.153+4.212<.001.00732
SKCMBCAR1P2 →+0.050+3.180<.001.00432
SKCMGLUD1P4 →+0.092+3.186<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,208 associations by consensus.

RNA5SP38 by SENP1 expression — BRCA

Box plot of RNA5SP38 in SENP1-low vs SENP1-high samples in BRCA.

Explore this box plot interactively →

Exploration