SEMA4B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEMA4B mutation is significantly associated with the RNA expression of many other genes, with 4,820 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SEMA4B-associated genes across cancer lineages are UNC13B, RNU7-30P, and LIN7C. Each is linked with SEMA4B in more than 2 cancer types. Because this analysis shows association rather than direction, both SEMA4B-to-partner and partner-to-SEMA4B results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SEMA4B→partner) and Y-score (partner→SEMA4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUNC13B →+0.479+3.584.001.00233
SKCMRNU7-30P →+0.338+4.356<.001.00132
UCECLIN7C →+0.598+2.269<.001.00132
UCECCOX15 →+0.551+4.008<.001<.00132
UCECNOCT →+0.821+2.747<.001<.00132
UCECFAM177A1 →+0.429+2.923<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,820 associations by consensus.

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