Across TCGA pan-cancer cohorts, SEC61G mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of SEC61G’s most consistent transcriptional readouts.
The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where SEC61G mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types SEC61G is over-expressed in tumor, although a few such as PDAC and LUAD show the opposite, repressed pattern.
HNSC, PDAC, and LSCC are the cancer types where SEC61G tumor–normal differential expression is most reproducible.