SCYGR6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCYGR6 RNA expression is significantly associated with the protein abundance of many other proteins, with 193 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SCYGR6-associated proteins across cancer lineages are RCN1, ARVCF_T642, and RPS2. Each is linked with SCYGR6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCYGR6-to-partner and partner-to-SCYGR6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCYGR6 versus RCN1 in PDAC, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCYGR6→partner) and Y-score (partner→SCYGR6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACRCN1 →-0.511-0.139<.001.00831
PDACARVCF_T642 →+0.559+0.075.007.00831
PDACRPS2 →-0.203-0.107.009.00831
PDACSEC16A_S1356 →-0.673-0.118.002.00831
PDACATXN2L →-0.178-0.104.001.00931
PDACCA5B →+0.420+0.141<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 193 associations by consensus.

SCYGR6 vs RCN1 — PDAC

Per-sample scatter of SCYGR6 vs RCN1 in PDAC (Pearson r = -0.40).

Explore this scatter interactively →

Exploration