SCYGR3

Across TCGA patient cohorts, SCYGR3 RNA expression is significantly associated with the protein abundance of many other proteins, with 618 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SCYGR3-associated proteins across cancer lineages are SMC1A_S957, SMG9, and SNRK_S639. Each is linked with SCYGR3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCYGR3-to-partner and partner-to-SCYGR3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCYGR3 versus SMC1A_S957 in LSCC, with a Pearson correlation of -0.50.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCYGR3→partner) and Y-score (partner→SCYGR3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SMC1A_S957 →	-0.649	-0.147	.001	.007	3	1
LSCC	SMG9 →	-0.161	-0.048	.001	.003	3	1
LSCC	SNRK_S639 →	+0.456	+0.076	.003	.006	3	1
LSCC	SPECC1L_S900 →	+0.346	+0.061	.004	.006	3	1
LSCC	SRP54_S18 →	+0.942	+0.078	<.001	.003	3	1
LSCC	SRP68_S267 →	+0.726	+0.090	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 618 associations by consensus.

SCYGR3 vs SMC1A_S957 — LSCC

Explore this scatter interactively →