SCYGR10

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCYGR10 RNA expression is significantly associated with the protein abundance of many other proteins, with 1,917 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SCYGR10-associated proteins across cancer lineages are NIPBL_S2672, GCFC2_S16, and EIF4G1_S1080. Each is linked with SCYGR10 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCYGR10-to-partner and partner-to-SCYGR10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCYGR10 versus NIPBL_S2672 in HNSC, with a Pearson correlation of 0.21.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCYGR10→partner) and Y-score (partner→SCYGR10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNIPBL_S2672 →+0.422+0.123.002.00932
GBMGCFC2_S16 →-0.767-0.383.003.00232
LUADEIF4G1_S1080 →-0.762-0.231.003.00132
LUADKIF20A_S878 →+1.405+0.361.001.00432
HNSCZFYVE26_S297 →-0.278-0.081.009.00931
HNSCZNF219_T695 →+0.623+0.366.005<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,917 associations by consensus.

SCYGR10 vs NIPBL_S2672 — HNSC

Per-sample scatter of SCYGR10 vs NIPBL_S2672 in HNSC (Pearson r = 0.21).

Explore this scatter interactively →

Exploration