SCYGR10

Across TCGA cell cohorts, SCYGR10 RNA expression is significantly associated with the go_rna of many other GO terms, with 203 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SCYGR10-associated GO terms across cancer lineages are Response to histamine, Regulation of PERK-mediated unfolded protein response, and Negative regulation of PERK-mediated unfolded protein response. Each is linked with SCYGR10 in more than 2 cancer types. Because this analysis shows association rather than direction, both SCYGR10-to-partner and partner-to-SCYGR10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to histamine grouped by SCYGR10-low versus SCYGR10-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCYGR10→partner) and Y-score (partner→SCYGR10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	Response to histamine →	-0.215	-0.067	.009	.008	3	3
LUNG_NSCLC_LUAD	Regulation of PERK-mediated unfolded protein response →	+0.086	+0.115	.001	.003	3	3
LUNG_NSCLC_LUAD	Negative regulation of PERK-mediated unfolded protein response →	+0.080	+0.072	.001	.004	3	3
LUNG_NSCLC_LUAD	T-helper 1 cell activation →	+0.137	+0.093	<.001	.001	3	3
LARGE_INTESTINE	Regulation of synaptic membrane adhesion →	-0.836	-0.066	.005	.002	3	3
SKIN	Regulation of endocytosis →	+0.038	+0.069	.004	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 203 associations by consensus.

Response to histamine by SCYGR10 expression — SKIN

Explore this box plot interactively →