Across TCGA patient cohorts, SCRT2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,741 significant associations in total. LGG shows the largest number of these associations.

The most reproducible SCRT2-associated GO terms across cancer lineages are Regulation of microtubule cytoskeleton organization, Peptide transport, and Positive regulation of protein sumoylation. Each is linked with SCRT2 in more than 10 cancer types. Because this analysis shows association rather than direction, both SCRT2-to-partner and partner-to-SCRT2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCRT2→partner) and Y-score (partner→SCRT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Regulation of microtubule cytoskeleton organization →	+0.033	+0.368	<.001	.004	3	10
PAAD	Peptide transport →	+0.031	+0.312	<.001	<.001	3	10
GBM	Positive regulation of protein sumoylation →	+0.035	+1.351	<.001	<.001	3	10
GBM	Regulation of cyclin-dependent protein kinase activity →	+0.034	+1.308	<.001	<.001	3	10
KIRC	Establishment of protein localization to membrane →	+0.024	+0.013	<.001	<.001	3	10
LGG	Dendritic spine development →	+0.025	+0.865	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,741 associations by consensus.

Exploration

SCRT2 survival (RNA) · tumor vs normal (RNA) · all SCRT2 data types