Across TCGA cell cohorts, SCRT2 RNA expression is significantly associated with the go_rna of many other GO terms, with 409 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SCRT2-associated GO terms across cancer lineages are Positive regulation of circadian rhythm, Cellular response to mechanical stimulus, and Cellular response to external stimulus. Each is linked with SCRT2 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCRT2-to-partner and partner-to-SCRT2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCRT2→partner) and Y-score (partner→SCRT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	Positive regulation of circadian rhythm →	-0.103	-1.566	<.001	.001	3	4
SKIN	Cellular response to mechanical stimulus →	-0.055	-0.002	.009	<.001	3	3
SKIN	Cellular response to external stimulus →	-0.056	-0.002	.007	.006	3	3
LUNG_SCLC	Female pregnancy →	-0.081	-1.345	.006	.002	3	3
LUNG_SCLC	Regulation of chloride transport →	-0.966	-1.294	.002	.001	3	3
LUNG_SCLC	Cell cycle phase transition →	+0.042	+0.980	.005	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 409 associations by consensus.

Exploration

SCRT2 survival (RNA) · tumor vs normal (RNA) · all SCRT2 data types