SCRIB

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCRIB mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCRIB-associated genes across cancer lineages are Caspase-7-cleavedD198, EGFR_pY1068, and MEK1. Each is linked with SCRIB in more than 4 cancer types. Because this analysis shows association rather than direction, both SCRIB-to-partner and partner-to-SCRIB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by SCRIB-low versus SCRIB-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCRIB→partner) and Y-score (partner→SCRIB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.466+1.874.019.04935
UCECEGFR_pY1068 →-0.215-1.874.010.04933
UCECMEK1 →+0.299+2.000.014.00932
UCECA-Raf_pS299 →-0.081-1.700.042.04232
UCECERK2 →+0.129+2.584.046.01032
UCECN-Ras →-0.105-2.680.008.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

Caspase-7-cleavedD198 by SCRIB expression — UCEC

Box plot of Caspase-7-cleavedD198 in SCRIB-low vs SCRIB-high samples in UCEC.

Explore this box plot interactively →

Exploration