SCLT1

Across TCGA patient cohorts, SCLT1 RNA expression is significantly associated with the RNA expression of many other genes, with 20,405 significant associations in total. ACC shows the largest number of these associations.

The most reproducible SCLT1-associated genes across cancer lineages are SMARCA5, HNRNPU, and ASAP1. Each is linked with SCLT1 in more than 33 cancer types. Because this analysis shows association rather than direction, both SCLT1-to-partner and partner-to-SCLT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCLT1 versus SMARCA5 in UVM, with a Pearson correlation of 0.87.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCLT1→partner) and Y-score (partner→SCLT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	SMARCA5 →	+2.063	+1.094	<.001	<.001	3	34
ACC	HNRNPU →	+0.892	+0.627	<.001	<.001	3	34
UVM	ASAP1 →	+1.788	+0.977	<.001	<.001	3	34
DLBC	SMG1 →	+1.597	+0.973	<.001	<.001	3	34
DLBC	TRAPPC10 →	+1.404	+0.867	<.001	<.001	3	34
UVM	NAA15 →	+1.516	+1.095	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,405 associations by consensus.

SCLT1 vs SMARCA5 — UVM

Explore this scatter interactively →