SCGB3A2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCGB3A2 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,154 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SCGB3A2-associated proteins across cancer lineages are CSRP1, ARHGEF17, and TGFB1I1. Each is linked with SCGB3A2 in more than 5 cancer types. Because this analysis shows association rather than direction, both SCGB3A2-to-partner and partner-to-SCGB3A2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCGB3A2 versus CSRP1 in BRCA, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB3A2→partner) and Y-score (partner→SCGB3A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACSRP1 →+0.476+0.621<.001.00336
LUADARHGEF17 →+0.260+3.079<.001<.00135
BRCATGFB1I1 →+0.463+0.687<.001<.00135
BRCATLN1_S2162 →+0.652+0.591<.001<.00135
BRCARAI14 →+0.413+0.870<.001<.00135
BRCALMCD1 →+0.461+0.664<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,154 associations by consensus.

SCGB3A2 vs CSRP1 — BRCA

Per-sample scatter of SCGB3A2 vs CSRP1 in BRCA (Pearson r = 0.26).

Explore this scatter interactively →

Exploration