SCGB3A1

Across TCGA cell cohorts, SCGB3A1 RNA expression is significantly associated with the go_rna of many other GO terms, with 171 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SCGB3A1-associated GO terms across cancer lineages are Endoplasmic reticulum to cytosol transport, Retrograde protein transport, ER to cytosol, and Microtubule bundle formation. Each is linked with SCGB3A1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCGB3A1-to-partner and partner-to-SCGB3A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoplasmic reticulum to cytosol transport grouped by SCGB3A1-low versus SCGB3A1-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB3A1→partner) and Y-score (partner→SCGB3A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	Endoplasmic reticulum to cytosol transport →	+0.083	+0.055	.001	.003	3	4
CNS	Retrograde protein transport, ER to cytosol →	+0.083	+0.055	.001	.003	3	4
CNS	Microtubule bundle formation →	-0.024	-0.034	.007	.009	3	3
CNS	Protein exit from endoplasmic reticulum →	+0.078	+0.055	.002	.003	3	3
CNS	Axoneme assembly →	-0.024	-0.048	.007	.003	2	4
CNS	Apoptotic signaling pathway →	+0.032	+0.043	<.001	.004	2	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 171 associations by consensus.

Endoplasmic reticulum to cytosol transport by SCGB3A1 expression — CNS

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