SCGB2A2

Across TCGA patient cohorts, SCGB2A2 mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. OV shows the largest number of these associations.

The most reproducible SCGB2A2-associated genes across cancer lineages are CD4+ Tcm and CD4+ Tem. Each is linked with SCGB2A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCGB2A2-to-partner and partner-to-SCGB2A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD4+ Tcm grouped by SCGB2A2-low versus SCGB2A2-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB2A2→partner) and Y-score (partner→SCGB2A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	CD4+ Tcm →	+0.014	+6.593	<.001	.020	3	1
OV	CD4+ Tem →	+0.030	+5.930	<.001	.032	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

CD4+ Tcm by SCGB2A2 expression — LUSC

Explore this box plot interactively →