SCGB1A1

Across TCGA patient cohorts, SCGB1A1 RNA expression is significantly associated with the RNA expression of many other genes, with 9,190 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible SCGB1A1-associated genes across cancer lineages are CXCL17, KRT4, and KRT13. Each is linked with SCGB1A1 in more than 19 cancer types. Because this analysis shows association rather than direction, both SCGB1A1-to-partner and partner-to-SCGB1A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCGB1A1 versus CXCL17 in UCS, with a Pearson correlation of 0.61.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB1A1→partner) and Y-score (partner→SCGB1A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCS	CXCL17 →	+2.339	+2.695	.002	.004	2	20
ESCA	KRT4 →	+4.909	+1.473	<.001	<.001	3	17
ESCA	KRT13 →	+4.482	+1.090	<.001	<.001	3	16
ESCA	MUC21 →	+3.079	+1.108	<.001	<.001	3	15
LUSC	BPIFB1 →	+3.432	+3.744	<.001	<.001	3	15
SCLC	SCGB3A1 →	+3.179	+3.334	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,190 associations by consensus.

SCGB1A1 vs CXCL17 — UCS

Explore this scatter interactively →