SCARNA7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCARNA7 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,627 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SCARNA7-associated proteins across cancer lineages are VDAC2_S115, DNAJA1_S335, and TNS2_S102. Each is linked with SCARNA7 in more than 4 cancer types. Because this analysis shows association rather than direction, both SCARNA7-to-partner and partner-to-SCARNA7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARNA7 versus VDAC2_S115 in OV, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA7→partner) and Y-score (partner→SCARNA7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVVDAC2_S115 →-0.745-0.827.002.00435
OVDNAJA1_S335 →-1.157-0.942.007.00735
OVTNS2_S102 →+0.632+0.885.008.00634
UCECCDC20_T70 →-0.983-0.842<.001.00434
LUADCLUH →-0.244-0.362<.001<.00134
LUADSEPTIN11 →+0.253+0.484<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,627 associations by consensus.

SCARNA7 vs VDAC2_S115 — OV

Per-sample scatter of SCARNA7 vs VDAC2_S115 in OV (Pearson r = -0.40).

Explore this scatter interactively →

Exploration