SCARNA18B

Across TCGA patient cohorts, SCARNA18B RNA expression is significantly associated with the protein abundance of many other proteins, with 7,364 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SCARNA18B-associated proteins across cancer lineages are PRPF3, VIRMA, and MIS12. Each is linked with SCARNA18B in more than 4 cancer types. Because this analysis shows association rather than direction, both SCARNA18B-to-partner and partner-to-SCARNA18B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARNA18B versus PRPF3 in LSCC, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA18B→partner) and Y-score (partner→SCARNA18B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PRPF3 →	+0.327	+0.560	<.001	<.001	3	5
HNSC	VIRMA →	+0.226	+0.892	<.001	<.001	3	4
UCEC	MIS12 →	+0.330	+0.890	.001	.001	3	4
GBM	MTA2 →	+0.313	+0.596	.004	<.001	3	4
UCEC	PARP1 →	+0.347	+1.130	<.001	<.001	3	4
HNSC	PARP1_T368 →	+0.545	+0.717	<.001	.007	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,364 associations by consensus.

SCARNA18B vs PRPF3 — LSCC

Explore this scatter interactively →