SCARA5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCARA5 protein abundance is significantly associated with the RNA expression of many other genes, with 1,179 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SCARA5-associated genes across cancer lineages are DES, CARD9, and SEPTIN3. Each is linked with SCARA5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCARA5-to-partner and partner-to-SCARA5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARA5 versus DES in COAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARA5→partner) and Y-score (partner→SCARA5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADDES →+3.690+0.669<.001<.00132
PDACCARD9 →-0.613-1.025.009.00332
COADSEPTIN3 →+0.455+0.623.001<.00131
COADGALNT16 →+0.203+0.513<.001.00331
COADASB2 →+0.879+0.759<.001<.00131
COADCHRDL1 →+1.381+0.583.004.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,179 associations by consensus.

SCARA5 vs DES — COAD

Per-sample scatter of SCARA5 vs DES in COAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration