Across TCGA cell cohorts, SCAMP4 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,458 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SCAMP4-associated GO terms across cancer lineages are Regulation of autophagosome maturation, Autophagosome assembly, and Autophagosome organization. Each is linked with SCAMP4 in more than 11 cancer types. Because this analysis shows association rather than direction, both SCAMP4-to-partner and partner-to-SCAMP4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCAMP4→partner) and Y-score (partner→SCAMP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Regulation of autophagosome maturation →	+0.096	+0.805	.002	<.001	3	12
SKIN	Autophagosome assembly →	+0.042	+0.569	.001	<.001	3	11
LARGE_INTESTINE	Autophagosome organization →	+0.055	+0.682	<.001	.001	3	11
LARGE_INTESTINE	Vacuolar transport →	+0.059	+0.747	<.001	<.001	3	10
BLOOD_Lymphoma	Regulation of protein localization to centrosome →	+0.065	+0.787	<.001	.004	3	10
LUNG_SCLC	Positive regulation of anaphase-promoting complex-dependent catabolic process →	+0.107	+0.542	.003	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,458 associations by consensus.

Exploration

SCAMP4 survival (RNA) · tumor vs normal (RNA) · all SCAMP4 data types