SCAMP1

Across TCGA cell cohorts, SCAMP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,790 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SCAMP1-associated GO terms across cancer lineages are Negative regulation of beige fat cell differentiation, Golgi organization, and Protein polyubiquitination. Each is linked with SCAMP1 in more than 10 cancer types. Because this analysis shows association rather than direction, both SCAMP1-to-partner and partner-to-SCAMP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of beige fat cell differentiation grouped by SCAMP1-low versus SCAMP1-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCAMP1→partner) and Y-score (partner→SCAMP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	Negative regulation of beige fat cell differentiation →	+0.132	+0.902	.008	.003	3	11
STOMACH	Golgi organization →	+0.077	+0.689	<.001	<.001	3	11
CNS	Protein polyubiquitination →	+0.030	+0.528	<.001	.006	3	11
OESOPHAGUS	Post-Golgi vesicle-mediated transport →	+0.067	+0.693	<.001	.001	3	11
BREAST	Target-directed miRNA degradation →	+0.093	+0.691	<.001	<.001	3	10
BLOOD_Lymphoma	Positive regulation of organelle assembly →	+0.042	+0.829	.001	.002	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,790 associations by consensus.

Negative regulation of beige fat cell differentiation by SCAMP1 expression — LUNG_NSCLC_LUSC

Explore this box plot interactively →