SBSN

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, SBSN mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated SBSN data layer compared with 29 for mass-spec protein and 11 for mutation status.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher SBSN mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated SBSN expression acts as an unfavorable survival marker, although some lineages such as HNSC and CCRCC show a favorable association.

HNSC, LUAD, and CCRCC are the cancer types where SBSN mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSTertileAll0.9710.764<.00180view →
LUADOSMedianAll0.7280.921.01220view →
CCRCCDFSMedianAll1.0000.870.01017view →
PDACDFSMedianIII,IV0.2260.803.0109view →
UCECOSTertileAll1.0000.906.0298view →
LSCCDFSQuartileII,III,IV1.0000.643.0215view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration