SBSN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SBSN protein abundance is significantly associated with the RNA expression of many other genes, with 12,250 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SBSN-associated genes across cancer lineages are ENDOU, RHCG, and S100A8. Each is linked with SBSN in more than 3 cancer types. Because this analysis shows association rather than direction, both SBSN-to-partner and partner-to-SBSN results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SBSN→partner) and Y-score (partner→SBSN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECENDOU →+1.597+1.136<.001.00334
LSCCRHCG →+2.380+1.215<.001<.00134
HNSCS100A8 →+2.235+1.095<.001<.00134
UCECIVL →+2.510+1.396<.001<.00134
HNSCS100A7A →+2.406+1.104<.001<.00134
LSCCKRT6A →+2.239+1.244<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,250 associations by consensus.

Exploration