SBSN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SBSN mutation is significantly associated with the RNA expression of many other genes, with 1,957 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SBSN-associated genes across cancer lineages are RNU6-879P, OR9Q2, and ACYP1. Each is linked with SBSN in more than 2 cancer types. Because this analysis shows association rather than direction, both SBSN-to-partner and partner-to-SBSN results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SBSN→partner) and Y-score (partner→SBSN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-879P →+0.362+2.292.002<.00133
SKCMOR9Q2 →+0.025+4.186<.001.00733
UCECACYP1 →+0.503+2.523.001.00133
UCECZCCHC9 →+0.455+2.513.002.00133
UCECDNAJC7 →+0.574+3.169<.001<.00133
UCECBNIP3P4 →+0.059+2.484<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,957 associations by consensus.

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