SBNO1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SBNO1 mutation is significantly associated with the RNA expression of many other genes, with 6,063 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SBNO1-associated genes across cancer lineages are MIR7975, RNA5SP271, and LINC01022. Each is linked with SBNO1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SBNO1-to-partner and partner-to-SBNO1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR7975 grouped by SBNO1-low versus SBNO1-high in GBM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SBNO1→partner) and Y-score (partner→SBNO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMIR7975 →+0.577+4.857<.001.00533
BRCARNA5SP271 →+0.359+4.148<.001.00233
GBMLINC01022 →+0.222+4.754<.001.00333
UCECMRPL44 →+0.505+1.807<.001<.00133
UCECCOX15 →+0.539+2.321<.001<.00133
UCECDFFB →+0.557+2.747<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,063 associations by consensus.

MIR7975 by SBNO1 expression — GBM

Box plot of MIR7975 in SBNO1-low vs SBNO1-high samples in GBM.

Explore this box plot interactively →

Exploration