SARNP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SARNP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,087 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SARNP-associated GO terms across cancer lineages are Negative regulation of ubiquitin protein ligase activity, U1 snRNA 3'-end processing, and U5 snRNA 3'-end processing. Each is linked with SARNP in more than 12 cancer types. Because this analysis shows association rather than direction, both SARNP-to-partner and partner-to-SARNP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SARNP→partner) and Y-score (partner→SARNP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTNegative regulation of ubiquitin protein ligase activity →+0.232+0.487<.001.005313
UPPER_AERODIGESTIVE_TRACTU1 snRNA 3'-end processing →+0.121+0.992<.001<.001312
UPPER_AERODIGESTIVE_TRACTU5 snRNA 3'-end processing →+0.121+0.992<.001<.001312
BONENegative regulation of cell adhesion →-0.090-0.646<.001<.001312
UPPER_AERODIGESTIVE_TRACTPositive regulation of chromosome condensation →+0.193+0.777<.001.001311
BLOOD_LymphomaMitotic sister chromatid cohesion →+0.120+0.631<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,087 associations by consensus.

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