SAPCD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAPCD1 mutation is significantly associated with the RNA expression of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SAPCD1-associated genes across cancer lineages are MIA-RAB4B, RNU6-1020P, and RPS6P7. Each is linked with SAPCD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SAPCD1-to-partner and partner-to-SAPCD1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAPCD1→partner) and Y-score (partner→SAPCD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIA-RAB4B →+0.086+3.185.007.00631
SKCMRNU6-1020P →+0.377+5.513<.001.00431
SKCMRPS6P7 →+0.108+5.037<.001.00931
SKCMRN7SKP117 →+0.163+4.979.002.00931
SKCMGTF3AP5 →+0.139+5.037<.001.00931
SKCMFGFR3P6 →+0.101+5.594<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

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