SAMD8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAMD8 protein abundance is significantly associated with the RNA expression of many other genes, with 2,817 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SAMD8-associated genes across cancer lineages are COMTD1, CXCL8, and CHCHD1. Each is linked with SAMD8 in more than 2 cancer types. Because this analysis shows association rather than direction, both SAMD8-to-partner and partner-to-SAMD8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAMD8 versus COMTD1 in BRCA, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD8→partner) and Y-score (partner→SAMD8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACOMTD1 →+1.310+0.518<.001<.00133
HNSCCXCL8 →+1.851+0.486.002<.00133
LUADCHCHD1 →+0.567+0.531<.001<.00133
OVNOP56 →+0.594+0.551.004.00432
OVPSMF1 →+0.619+0.603<.001.00132
OVWDR54 →+1.059+0.587<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,817 associations by consensus.

SAMD8 vs COMTD1 — BRCA

Per-sample scatter of SAMD8 vs COMTD1 in BRCA (Pearson r = 0.53).

Explore this scatter interactively →

Exploration