SAMD8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAMD8 mutation is significantly associated with the RNA expression of many other genes, with 1,029 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SAMD8-associated genes across cancer lineages are ZBTB45P2, IGHD3-16, and RNU6ATAC30P. Each is linked with SAMD8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SAMD8-to-partner and partner-to-SAMD8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZBTB45P2 grouped by SAMD8-low versus SAMD8-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD8→partner) and Y-score (partner→SAMD8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCZBTB45P2 →+0.060+3.891<.001.00832
UCECIGHD3-16 →+1.111+2.458<.001<.00132
UCECRNU6ATAC30P →+0.344+2.154<.001.00432
UCECIGHD1-1 →+0.554+3.220<.001.00532
UCECRNU6-718P →+0.163+3.761<.001.00132
COADMIR378E →+0.813+5.136<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,029 associations by consensus.

ZBTB45P2 by SAMD8 expression — LUSC

Box plot of ZBTB45P2 in SAMD8-low vs SAMD8-high samples in LUSC.

Explore this box plot interactively →

Exploration