SAMD7

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAMD7 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,614 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SAMD7-associated GO terms across cancer lineages are Positive regulation of DNA repair, Positive regulation of double-strand break repair, and DNA integrity checkpoint signaling. Each is linked with SAMD7 in more than 19 cancer types. Because this analysis shows association rather than direction, both SAMD7-to-partner and partner-to-SAMD7 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD7→partner) and Y-score (partner→SAMD7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADPositive regulation of DNA repair →+0.061+0.192<.001<.001320
STADPositive regulation of double-strand break repair →+0.064+0.165<.001<.001318
STADDNA integrity checkpoint signaling →+0.067+0.154<.001<.001318
STADTelomere organization →+0.062+0.153<.001<.001318
STADPositive regulation of intracellular protein transport →+0.067+0.154<.001<.001317
STADRegulation of organelle assembly →+0.062+0.133<.001<.001317
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,614 associations by consensus.

Exploration