SAMD13

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SAMD13 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,272 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SAMD13-associated GO terms across cancer lineages are Positive regulation of extrinsic apoptotic signaling pathway, Dentinogenesis, and Chondroitin sulfate proteoglycan biosynthetic process. Each is linked with SAMD13 in more than 8 cancer types. Because this analysis shows association rather than direction, both SAMD13-to-partner and partner-to-SAMD13 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD13→partner) and Y-score (partner→SAMD13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEPositive regulation of extrinsic apoptotic signaling pathway →-0.122-1.042<.001<.00139
BONEDentinogenesis →-1.663-0.959<.001<.00138
BONEChondroitin sulfate proteoglycan biosynthetic process →-0.095-0.706.001.00138
BONEChondroitin sulfate proteoglycan metabolic process →-0.142-0.975<.001<.00138
UPPER_AERODIGESTIVE_TRACTLymphocyte chemotaxis →-0.308-0.649<.001<.00137
BONEEndoplasmic reticulum organization →-0.093-1.018<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,272 associations by consensus.

Exploration