SALRNA3

Across TCGA patient cohorts, SALRNA3 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,508 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SALRNA3-associated GO terms across cancer lineages are Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, Fibroblast proliferation, and DNA biosynthetic process. Each is linked with SALRNA3 in more than 14 cancer types. Because this analysis shows association rather than direction, both SALRNA3-to-partner and partner-to-SALRNA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay grouped by SALRNA3-low versus SALRNA3-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SALRNA3→partner) and Y-score (partner→SALRNA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →	+0.066	+0.074	<.001	<.001	3	15
STAD	Fibroblast proliferation →	+0.051	+0.075	<.001	<.001	3	14
STAD	DNA biosynthetic process →	+0.063	+0.081	<.001	<.001	3	14
STAD	Regulation of cilium assembly →	+0.049	+0.071	<.001	<.001	3	14
STAD	Microtubule organizing center organization →	+0.058	+0.087	<.001	<.001	3	14
STAD	Regulation of DNA-templated transcription initiation →	+0.055	+0.074	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,508 associations by consensus.

Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay by SALRNA3 expression — STAD

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