RTTN

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RTTN mutation is significantly associated with the RNA expression of many other genes, with 1,027 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RTTN-associated genes across cancer lineages are RPL10L, TAS2R38, and MTO1. Each is linked with RTTN in more than 2 cancer types. Because this analysis shows association rather than direction, both RTTN-to-partner and partner-to-RTTN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL10L grouped by RTTN-low versus RTTN-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTTN→partner) and Y-score (partner→RTTN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUERPL10L →+0.038+4.930<.001.00832
SOFT_TISSUETAS2R38 →+0.035+5.369<.001.00432
LARGE_INTESTINEMTO1 →+0.671+2.364<.001<.00132
LARGE_INTESTINEPLTP →-1.833-3.459.001<.00132
LARGE_INTESTINEMAPK8 →+0.628+2.537.001<.00132
LARGE_INTESTINEC1QBP →+0.670+2.590<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,027 associations by consensus.

RPL10L by RTTN expression — SOFT_TISSUE

Box plot of RPL10L in RTTN-low vs RTTN-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration