RTP3

Across TCGA patient cohorts, RTP3 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,036 significant associations in total. THCA shows the largest number of these associations.

The most reproducible RTP3-associated GO terms across cancer lineages are Regulation of viral genome replication, Nucleobase-containing compound transport, and Regulation of T cell receptor signaling pathway. Each is linked with RTP3 in more than 10 cancer types. Because this analysis shows association rather than direction, both RTP3-to-partner and partner-to-RTP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of viral genome replication grouped by RTP3-low versus RTP3-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RTP3→partner) and Y-score (partner→RTP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of viral genome replication →	+0.050	+0.062	<.001	.001	2	11
STAD	Nucleobase-containing compound transport →	+0.050	+0.055	<.001	<.001	3	10
LAML	Regulation of T cell receptor signaling pathway →	+0.046	+0.198	<.001	<.001	3	9
STAD	Regulation of establishment of protein localization to chromosome →	+0.051	+0.086	<.001	<.001	3	9
DLBC	Obsolete regulation of histone acetylation →	+0.049	+0.107	.001	.004	2	10
STAD	DNA modification →	+0.044	+0.063	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,036 associations by consensus.

Regulation of viral genome replication by RTP3 expression — STAD

Explore this box plot interactively →