RTP3

Across TCGA cell cohorts, RTP3 RNA expression is significantly associated with the RNA expression of many other genes, with 2,655 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible RTP3-associated genes across cancer lineages are LRRC2, LTF, and PDCD1LG2. Each is linked with RTP3 in more than 3 cancer types. Because this analysis shows association rather than direction, both RTP3-to-partner and partner-to-RTP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTP3 versus LRRC2 in CNS, with a Pearson correlation of 0.42.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTP3→partner) and Y-score (partner→RTP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	LRRC2 →	+1.212	+0.248	<.001	<.001	3	4
SOFT_TISSUE	LTF →	+0.805	+0.126	<.001	.001	3	4
SOFT_TISSUE	PDCD1LG2 →	+2.584	+0.075	<.001	.004	3	3
SOFT_TISSUE	KRT34 →	+2.155	+0.143	<.001	<.001	3	3
SOFT_TISSUE	CDK15 →	+1.963	+0.139	<.001	.003	3	3
SOFT_TISSUE	FUT8 →	+1.311	+0.134	<.001	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,655 associations by consensus.

RTP3 vs LRRC2 — CNS

Explore this scatter interactively →