RTP2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,448 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RTP2-associated GO terms across cancer lineages are Establishment of pigment granule localization, Golgi vesicle transport, and Lipoprotein biosynthetic process. Each is linked with RTP2 in more than 9 cancer types. Because this analysis shows association rather than direction, both RTP2-to-partner and partner-to-RTP2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RTP2→partner) and Y-score (partner→RTP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADEstablishment of pigment granule localization →+0.031+0.073<.001<.001310
STADGolgi vesicle transport →+0.056+0.068<.001<.001310
STADLipoprotein biosynthetic process →+0.041+0.075<.001<.00139
STADCytoskeleton-dependent intracellular transport →+0.039+0.074<.001<.00139
STADNegative regulation of cyclin-dependent protein serine/threonine kinase activity →+0.041+0.066<.001<.00139
STADVesicle-mediated transport to the plasma membrane →+0.051+0.067<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,448 associations by consensus.

Exploration