RTN4RL2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTN4RL2 protein abundance is significantly associated with the RNA expression of many other genes, with 6,017 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTN4RL2-associated genes across cancer lineages are FAIM2, NEFH, and IQSEC3. Each is linked with RTN4RL2 in more than 2 cancer types. Because this analysis shows association rather than direction, both RTN4RL2-to-partner and partner-to-RTN4RL2 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4RL2→partner) and Y-score (partner→RTN4RL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAFAIM2 →+2.053+0.695.002<.00133
GBMNEFH →+1.501+1.022<.001<.00132
GBMIQSEC3 →+1.059+1.207<.001<.00132
BRCACD22 →+1.537+0.567.008.00732
BRCAHOXD1 →+0.458+0.653<.001<.00132
GBMKCNA5 →+0.530+0.628<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,017 associations by consensus.

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