Across TCGA cell cohorts, RTN4RL1 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RTN4RL1-associated genes across cancer lineages are GP2, FCGR3B, and OR52H1. Each is linked with RTN4RL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RTN4RL1-to-partner and partner-to-RTN4RL1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4RL1→partner) and Y-score (partner→RTN4RL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	GP2 →	+0.237	+3.823	<.001	.006	3	1
LARGE_INTESTINE	FCGR3B →	+0.140	+4.882	<.001	<.001	3	1
LARGE_INTESTINE	OR52H1 →	+0.027	+4.347	<.001	.001	3	1
LARGE_INTESTINE	FREM3 →	+0.102	+4.054	.007	.004	3	1
LARGE_INTESTINE	WFDC6 →	+0.032	+3.930	<.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

Exploration

RTN4RL1 survival (RNA) · tumor vs normal (RNA) · all RTN4RL1 data types