RTN4IP1

Across TCGA patient cohorts, RTN4IP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,590 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RTN4IP1-associated proteins across cancer lineages are CDC40, VTA1, and QRSL1. Each is linked with RTN4IP1 in more than 6 cancer types. Because this analysis shows association rather than direction, both RTN4IP1-to-partner and partner-to-RTN4IP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTN4IP1 versus CDC40 in GBM, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4IP1→partner) and Y-score (partner→RTN4IP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CDC40 →	+0.223	+0.273	.004	.005	2	7
GBM	VTA1 →	+0.387	+0.350	<.001	<.001	3	5
GBM	QRSL1 →	+0.436	+0.433	<.001	<.001	3	5
BRCA	MDN1_T4898 →	+0.432	+0.427	<.001	<.001	3	5
BRCA	PM20D2 →	+0.744	+0.620	.001	<.001	3	5
LSCC	PRIM2 →	+0.357	+0.475	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,590 associations by consensus.

RTN4IP1 vs CDC40 — GBM

Explore this scatter interactively →