RTN4IP1

Across TCGA patient cohorts, RTN4IP1 protein abundance is significantly associated with the RNA expression of many other genes, with 10,137 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RTN4IP1-associated genes across cancer lineages are SYDE1, ACTA2, and PMP22. Each is linked with RTN4IP1 in more than 4 cancer types. Because this analysis shows association rather than direction, both RTN4IP1-to-partner and partner-to-RTN4IP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTN4IP1 versus SYDE1 in OV, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4IP1→partner) and Y-score (partner→RTN4IP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	SYDE1 →	-0.803	-0.432	.004	.003	3	5
OV	ACTA2 →	-1.529	-0.444	.001	<.001	3	4
OV	PMP22 →	-1.063	-0.509	<.001	<.001	3	4
OV	PCDH12 →	-0.529	-0.411	.002	.001	3	4
LSCC	QRSL1 →	+0.572	+0.408	.002	<.001	3	4
OV	TMTC3 →	-0.542	-0.435	.005	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,137 associations by consensus.

RTN4IP1 vs SYDE1 — OV

Explore this scatter interactively →