RTL8A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTL8A mutation is significantly associated with the RNA expression of many other genes, with 681 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RTL8A-associated genes across cancer lineages are FTLP16, ARL5AP1, and RPS27P27. Each is linked with RTL8A in more than 1 cancer types. Because this analysis shows association rather than direction, both RTL8A-to-partner and partner-to-RTL8A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTL8A→partner) and Y-score (partner→RTL8A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADFTLP16 →+0.087+3.868.001.00332
BRCAARL5AP1 →+0.111+7.049<.001<.00132
UCECRPS27P27 →+0.235+1.680<.001.00632
LUADPRAMEF34P →+0.014+7.930<.001.00832
BRCANEK2P1 →+0.033+4.506.001.00931
BRCARNA5SP476 →+0.325+5.711<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 681 associations by consensus.

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