RTL5

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTL5 RNA expression is significantly associated with the RNA expression of many other genes, with 18,294 significant associations in total. THYM shows the largest number of these associations.

The most reproducible RTL5-associated genes across cancer lineages are NHSL2, DCHS1, and C20orf194. Each is linked with RTL5 in more than 32 cancer types. Because this analysis shows association rather than direction, both RTL5-to-partner and partner-to-RTL5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTL5 versus NHSL2 in LAML, with a Pearson correlation of 0.72.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTL5→partner) and Y-score (partner→RTL5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LAMLNHSL2 →+2.066+1.513<.001<.001333
UCSDCHS1 →+1.477+1.469.001<.001331
THYMC20orf194 →+1.351+1.468<.001<.001330
UCSNAP1L3 →+1.847+1.443.002.001231
UCSIKZF4 →+1.045+1.092<.001.007231
STADZNF853 →+1.574+1.201<.001<.001329
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,294 associations by consensus.

RTL5 vs NHSL2 — LAML

Per-sample scatter of RTL5 vs NHSL2 in LAML (Pearson r = 0.72).

Explore this scatter interactively →

Exploration