RTKN

Across TCGA cell cohorts, RTKN RNA expression is significantly associated with the RNA expression of many other genes, with 9,629 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible RTKN-associated genes across cancer lineages are CAMSAP3, CRB3, and HOOK1. Each is linked with RTKN in more than 9 cancer types. Because this analysis shows association rather than direction, both RTKN-to-partner and partner-to-RTKN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTKN versus CAMSAP3 in LIVER, with a Pearson correlation of 0.76.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTKN→partner) and Y-score (partner→RTKN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	CAMSAP3 →	+3.930	+2.687	<.001	<.001	3	10
STOMACH	CRB3 →	+3.680	+2.760	<.001	<.001	3	10
STOMACH	HOOK1 →	+2.213	+1.669	<.001	<.001	3	10
LIVER	LLGL2 →	+2.752	+2.459	.004	.002	2	10
SKIN	PLEKHH1 →	+2.282	+1.078	<.001	<.001	3	9
SOFT_TISSUE	TRAF4 →	+1.201	+1.316	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,629 associations by consensus.

RTKN vs CAMSAP3 — LIVER

Explore this scatter interactively →