RTF2

Across TCGA patient cohorts, RTF2 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,791 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RTF2-associated proteins across cancer lineages are TOMM34, VAPB, and PRPF6. Each is linked with RTF2 in more than 6 cancer types. Because this analysis shows association rather than direction, both RTF2-to-partner and partner-to-RTF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTF2 versus TOMM34 in OV, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RTF2→partner) and Y-score (partner→RTF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	TOMM34 →	+0.592	+0.660	<.001	<.001	3	7
OV	VAPB →	+0.343	+0.484	.003	.001	3	6
LSCC	PRPF6 →	+0.311	+0.432	<.001	<.001	3	6
LSCC	RAE1 →	+0.279	+0.501	<.001	<.001	3	6
LSCC	CSE1L →	+0.384	+0.379	<.001	<.001	3	6
COAD	STAU1 →	+0.352	+0.450	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,791 associations by consensus.

RTF2 vs TOMM34 — OV

Explore this scatter interactively →